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Publications

  • Detailed information available at the Google Scholar (Link)

Publications, Intellectual Property, And Presentations

  1. Badshah, S. L., Stirbet, A., Siddiquee, M.#, Govindjee, G., Kang, D.-W., Bridgeman, T., Seo, Y. (2024) “Inhibition of CO2 Fixation in Microcystis aeruginosa as a Potential Target for the Control of Freshwater Cyanobacterial Harmful Algal Blooms” ES&T Water. (Link) 
  2. Nirmalkar, K., Patel, J., Kang, D.-W., Adams, J., and Krajmalnik-Brown R., (2024) “Bimodal distribution of Candida albicans in children with Autism linked with ASD symptoms” Gut Microbes Reports, 1(1): 1-13. 
  3. Aldossari, F.#, Leong, S. C., Aldossari, M., Tripathi, R. C., Hoffmann, P., Kang, D.-W., Kim, D.-S. (2024) “Effects of flow-induced electromagnetic field and surface roughness on antifouling activity of phenolic compounds” Biofouling, 1-13. (Link)
  4. Chaffin, J. D., Barker, K. B., Bickman, S. R., Bratton, J. F., Bridgeman, T. B., Bhatia, M.#, Buchholz, S. D., Bullerjahn, G., Johengen, T., Kang, D.-W., Lewis, G. G., Lochhead, M., Macdonald, B. M., Petrou, C. L., Platz, M., Purcell, H., Roser, J., Siddiquee, M.#, Snyder, B., Taylor, A. T., Verhamme, E., Westrick, J. A., and Seo, Y., (2024) “An assessment of a biosensor system for the quantification of microcystins in freshwater cyanobacterial blooms” Analytical Biochemistry, 687: 115429. (Link)
  5. Bohrerova, Z., Brinkman, N. E., Chakravarti, R., Chattopadhyay, S., Faith, S. A., Garland, J., Herrin, J., Hull, N., Jahne, M., Kang, D.-W., Keely, S. P., Lee, J., Lemeshow, S., Lenhart, J., Lytmer, E., Malgave, D., Miao, L., Minard-Smith, A., Mou, Z., Nagarkar, M., Quintero, A., Savona, F. D. R., Senko, J., Slonczewski, J. L., Spurbeck, R. R., Sovic, M. G., Taylor, R. T., Weavers, L. K., Weir, M. (2023) “Ohio Coronavirus Wastewater Monitoring Network: implementation of statewide monitoring for protecting public health” Journal of Public Health Management and Practice 29(6): 845-853. (Link)
  6. Nirmalkar K., Qureshi, F. Kang, D.-W., Hahn, J., Adams, J. B., Krajmalnik-Brown, R. (2022) “Shotgun metagenomics study reveals alteration in sulfur metabolism and oxidative stress in children with autism and improvement after microbiota transfer therapy” International Journal of Molecular Sciences 23(21): 13481. (Link)
  7. McGowan, J.^, Borucki, M.^, Omairi, H^,#, Varghese, M., Vellani S., Chakravarty S., Fan S., Chattopadhyay, S., Siddiquee, M.#, Thissen, J. B., Mulakken, N., Moon, J., Kimbrel, J., Tiwari, A. K., Taylor, R. T., Kang, D.-W.*, Jaing, C.*, Chakravarti, R.*, Chattopadhyay, S.* (2022) “SARS-CoV-2 Monitoring in Wastewater Reveals Novel Variants and Biomarkers of Infection” Viruses 14(9): 2032 [^co-first authors and *co-corresponding authors] (Link)
  8. Baranwal, P.#, Kang, D.-W., Seo, Y. (2022) “Impacts of algal organic matter and humic substances on microcystin-LR removal and their biotransformation during the biodegradation process” Science of the total environment 852: 157993. (Link)
  9. Fouquier, J., Huizar, N. M., Glickman, C., Kang, D.-W., Maldonado, J., Jones, R., Johnson, K., Adams, J., Krajmalnik-Brown, R., Lozupone, C. (2021) “The gut microbiome in autism: Study-site effects and longitudinal analysis of behavior change” mSystem 6(2): e00848-20. (Link)
  10. Kang, D.-W., Adams, J. B., Vargason, T., Santiago, M., Hahn, J., Krajmalnik-Brown, R. (2020) “Distinct fecal and plasma metabolites in children with autism spectrum disorders and their modulation after microbiota transfer therapy” mSphere 5(5): e00314-20. (Link)
  11. Qureshi, F., Adams, J. B., Hanagan, K., Kang, D.-W., Krajmalnik-Brown R., Hahn, J. (2020) “Multivariate analysis of fecal metabolites from children with autism spectrum disorder and gastrointestinal symptoms before and after microbiota transfer therapy” Personalized Medicine 10(152): 152. (Link)
  12. Kim, H., Kim, T., Aziz, Azilah, Choi, D., Lovitt, R. W., Kang, D.-W.*, Chang, I. S*. (2020) “Structural heterogeneity yet high similarity of the microbial community on reverse osmosis membrane-driven biofilms during seawater desalination” Environmental Science Water Research & Technology 6: 2066 [*co-corresponding authors] (Link)
  13. Li, L.#, Ning, D., Jeon, Y.#, Ryu, H., Santo Domingo, J. W., Kang, D.-W., Kadudula, A., Seo, Y. (2020) “Ecological insights into temporal dynamics of the bacterial community assembly in full-scale biologically active carbon filters underwent ozone implementation: Application of null model and network analysis” Science of the Total Environment 14140. (Link)
  14. Ilhan, Z. E., DiBaise, J. K., Dautel, S. E., Isern, S. G., Kim, Y.-M., Hoyt, D. W., Schepmoes, A. A., Brewer, H. M., Weitz, K. K., Metz, T. O., Crowell, M. D., Kang, D.-W., Rittmann, B. E., Krajmalnik-Brown, R. (2020) “Temporospatial shifts in the human gut microbiome and metabolome after gastric bypass surgery” npg Biofilms and Microbiomes 6(1): 1-12. (Link)
  15. Adams, J. B., Borody, T. J., Kang, D.-W., Khoruts, A., Krajmalnik-Brown, R., Sadowsky, M. J. (2019) “Microbiota transplant therapy and autism: lessons for the clinic” Expert review of gastroenterology & hepatology 13(11): 1033-1037. (Link)
  16. Adams, J. B., Vargason, T., Kang, D.-W., Krajmalnik-Brown, R., Hahn, J. (2019) “Multivariate analysis of plasma metabolites in children with autism spectrum disorder and gastrointestinal symptoms before and after microbiota transfer therapy” Processes 7(11): 806. (Link)
  17. Sharon, G., Cruz, N. J., Kang, D.-W., Gandal, M. J., Wang, B., Kim, Y. M., Zink, E. M., Casey, C. P., Taylor, B. C., Lane, C. J., Bramer, L. M., Isern, N. G., Hoyt, D. W., Noecker, C., Sweredoski, M., Moradian, A., Borenstein, E., Jansson, J. K., Knight, R., Metz, T. O., Lois, C., Geschwind, D. H., Krajmalnik-Brown, R., Mazmanian, S. K. (2019) “Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice” Cell 177(6): 1600-1618. (Link)
  18. Bokulich, N.A., Maldonado, J., Kang, D.-W., Krajmalnik-Brown, R., Caporaso, J.G. (2019) “Rapidly processed stool swabs approximate stool microbiota profiles” mSphere 4(2): e00208-19. (Link)
  19. Kang, D.-W., Adams, J.B., Coleman, D.M., Pollard, E., Maldonado, J., McDonough-Menas S., Caporaso, J.C., Krajmalnik-Brown, R. (2019) “Long-term benefit of Microbiota Transfer Therapy on autism symptoms and gut microbiota” Scientific Reports9: 5821. (Link)
  20. Kang, D.-W., Ilhan, Z. E., Isern, N., Hoyt, D., Howsmon, D. P., Shaffer, M., Lozupone, C. A., Hahn, J., Adams, J. B., Krajmalnik-Brown, R. (2018) “Differences in fecal microbial metabolites and microbiota of children with autism spectrum disorders” Anaerobe 49:121-131. (Link)
  21. Ilhan, Z. E., DiBaise, J. K., Isern, N., Hoyt, D., Marcus, A. K., Kang, D.-W., Crowell, M., Rittmann, B., Krajmalnik-Brown, R. (2017) “Distinctive microbiomes and metabolites linked withweight loss after gastric bypass, but not gastric banding” ISME Journal, doi: 10.1038/ismej.2017.71.
  22. Ilhan, Z. E., Marcus, A. K., Kang, D.-W., Rittmann, B., Krajmalnik-Brown, R. (2017) “pH-mediated microbial and metabolic interactions in fecal enrichment cultures” mSphere 2(3): e00047. 
  23. Kang, D.-W.*, Adams, J. B.*, Gregory, A. C.*, Borody, T., Chittick, L., Fasano, A., Khoruts, A., Geis, E., Maldonado, J., McDonough-Means, S., Pollard, E. L., Roux, S., Sadowsky, M. J., Schwarzberg Lipson, K., Sullivan, M. B., Caporaso, J. G., and Krajmalnik-Brown, R. (2017) “Microbiota transfer alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study” Microbiome 5:10. [*co-first authors] [Selected as a must-read article as part of the 2018 Springer Nature Change the World initiative, and Top 5 most accessed article published in Microbiome]
  24. Kang, D.-W., DiBaise, J.K., Ilhan, E.Z., Crowell, M.D., Rideout, J. R., Caporaso J. G., Rittmann, B.E., and Krajmalnik-Brown, R. (2015) “Gut microbial and short-chain fatty acid profiles in adults with chronic constipation before and after treatment with lubiprostone”Anaerobe 33:33-41. 
  25. Krajmalnik-Brown R, Lozupone C, Kang, –W, Adams J.B. (2015) “Gut bacteria in children with Autism Spectrum Disorders: Challenges and promise of studying how complex community influences a complex disease” Microbial Ecology in Health and Disease 26: 26914. 
  26. Ruiz, V., Ilhan, Z. E., Kang, D.-W., Krajmalnik-Brown, R., Buitron, G. (2014) “The source of inoculum plays a defining role in the development of MEC microbial consortia fed with acetic and propionic acid mixtures” Journal of Biotechnology 182: 11-18.
  27. Delgado, A. G., Kang, D.-W., Nelson, K. G., Fajardo-Williams, D., Done, H. Y., Potat, S. C., and Krajmalnik-Brown, R. (2014) “Selective enrichment techniques abridge soil or sediment microbial diversity to yield robust chlorinated ethane-respiring Dehalococcoides” PLOS ONE 9(6): e68322.
  28. Kang, D.-W. and Noguera, D.R., (2014) “Candidatus Accumulibacter phosphatis: An elusive bacterium responsible for enhanced biological phosphorus removal” Journal of Environmental Engineering, 140(1): 2-10. 
  29. Kang, D.-W.*, Park, J.G.*, Ilhan, E.Z., Wallstrom, G., LaBaer, J., Adams, J.B., and Krajmalnik-Brown R. (2013) “Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children” PLOS ONE 8(7): e68322. [*co-first authors] 
  30. Ontiveros-Valencia, A., Ilhan, Z. E., Kang, D.-W., Rittmann, B., Krajmalnik-Brown, R. (2013) “Phylogenetic analysis of nitrate- and sulfate-reducing bacteria in a hydrogen-fed biofilm” FEMS microbiology ecology 85(1): 158-167. 
  31. Joseph, M., Parameswaran, P., Kang, D.-W., Krajmalnik-Brown, R., and Torres, C. (2012) “Enrichment and analysis of anode-respiring bacteria from diverse anaerobic inocula” Environmental Science & Technology 46(18): 10349-10355. 
  32. Ziv-El M., Popat, S.C., Parameswaran, P., Kang, D.-W., Polasko, A., Halden R.U., Rittmann B.E., and Krajmalnik-Brown R. (2012) “Using electron balances and molecular techniques to assess trichloroethene induced shifts to a dechlorinating microbial community” Biotechnology and Bioengineering 109(9): 2230-2239.
  33. Krajmalnik-Brown, R., Ilhan, Z.E., Kang, D.-W., and DiBaise, J.K. (2012) “Effects of Gut Microbes on Nutrient Absorption and Energy Regulation” Nutrition in Clinical Practice 27(2): 201-214. [1st most cited paper in Nutrition in Clinical Practice in 2012]
  34. Parameswaran, P., Torres, C.I., Kang, D.-W., Rittmann, B.E., and Krajmalnik-Brown, R. (2012) “The role of homoacetogenic bacteria as efficient hydrogen scavengers in microbial electrochemical cells (MXCs)” Water Science and Technology 65(1): 1-6.
  35. Ziv-El, M., Delgado, A.G., Yao, Y., Kang, D.-W., Nelson, K.G., Halden, R.U., and Krajmalnik-Brown, R. (2011) Development and characterization of DehaloR^2, a novel anaerobic microbial consortium performing rapid dechlorination of TCE to ethene (vol 92, pg 1063, 2011). Applied Microbiology and Biotechnology 92(5): 1063-1071. 
  36. Zhao, H.P., Van Ginkel, S., Tang, Y.N., Kang, D.-W., Rittmann, B., and Krajmalnik-Brown, R. (2011) Interactions between Perchlorate and Nitrate Reductions in the Biofilm of a Hydrogen-Based Membrane Biofilm Reactor. Environmental Science & Technology 45(23): 10155-10162.
  37. Li, G.Z., Park, S., Kang, D.-W., Krajmalnik-Brown, R., and Rittmann, B.E. (2011) 2,4,5-Trichlorophenol Degradation Using a Novel TiO2-Coated Biofilm Carrier: Roles of Adsorption, Photocatalysis, and Biodegradation. Environmental Science & Technology 45(19): 8359-8367.
  38. Garcia-Pena, E.I., Parameswaran, P., Kang, D.-W., Canul-Chan, M., and Krajmalnik-Brown, R. (2011) Anaerobic digestion and co-digestion processes of vegetable and fruit residues: Process and microbial ecology. Bioresource Technology 102(20): 9447-9455.

Book Chapter

  • Yilmaz L. S., Kang, D.-W., and Noguera, D. R. (2009) “Fluorescence in situ hybridization (FISH) and probe design”, Book chapter in Microbial Ecology of Activated Sludge. Edited by Robert Seviour and Per H. Nielsen, IWA Publishing, 2010.

Proceedings Papers

  • Kang, D.-W. and Noguera, D. R. (2011) “Development of a novel strategy to cultivate enhanced biological phosphorus removal (EBPR) microorganisms”, Proceedings of the Water Environment Federation (11), 4833-4851.
  • Kang, D.-W. and Noguera, D. R. (2009) “Pilot-Scale Investigation to Achieve Very Low Nitrogen and Phosphorus Effluents by Retrofitting a University of Cape Town (UCT) Process”, Proceedings of the Water Environment Federation (10), 7396-7411

Patents

  • US patent 11202808, “Methods for treating autism spectrum disorder and associated symptoms” (Dec 2021) Adams, James; Krajmalnik-Brown, Rosa; Kang, D.-W; Sadowsky, Michael; Khoruts, Alex and Borody, Thomas.
  • US Patent 9,719,144, “Microbiome markers and therapies for autism spectrum disorders” (2017) Krajmalnik-Brown, R., Kang, D.-W., Park, J. G., Labaer, J., Ilhan, Z.